Transcript: lnc-MASTL-2:1

Basic information

LNCipedia transcript ID: lnc-MASTL-2:1 
LNCipedia gene ID: lnc-MASTL-2
Ensembl Gene ID: ENSG00000260151
Ensembl Transcript ID: ENST00000568270
Location (hg38): chr10:27343436-27344917
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1395 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000568270.1; RP11-748L13.6-001; OTTHUMT00000431569.1; NONHSAT011903
Alternative gene names: ENSG00000260151.1; RP11-748L13.6; OTTHUMG00000176148.1; AL355493.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.148 non-coding 
CPAT coding probability 3.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MASTL-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MASTL-2:1
4.0 lnc-MASTL-2:1
4.1 lnc-MASTL-2:1
5.0 lnc-MASTL-2:1
5.1 lnc-NPY4R2-244:1
5.2 lnc-MASTL-2:1