Transcript: lnc-MAT2B-3:23

Basic information

LNCipedia transcript ID: lnc-MAT2B-3:23 
LNCipedia gene ID: lnc-MAT2B-3
Location (hg38): chr5:164296769-164488516
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2271 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000241956.5|FTMT21900035448.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.718 non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MAT2B-3:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MAT2B-3:23
5.0 lnc-MAT2B-3:23
5.1 lnc-ATP6V0E1-131:2
5.2 lnc-MAT2B-3:23