Transcript: lnc-MB21D2-2:1

Basic information

LNCipedia transcript ID: lnc-MB21D2-2:1 
LNCipedia gene ID: lnc-MB21D2-2
Location (hg38): chr3:192956857-192957529
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 673 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000067293.1|ENCT00000312961.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -319.2415 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MB21D2-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MB21D2-2:1
5.0 lnc-MB21D2-2:1
5.1 lnc-LRRC15-16:1
5.2 lnc-MB21D2-2:1