Transcript: lnc-MBOAT1-2:14

Basic information

LNCipedia transcript ID: lnc-MBOAT1-2:14 
LNCipedia gene ID: lnc-MBOAT1-2
Ensembl Gene ID: ENSG00000228412
Ensembl Transcript ID: ENST00000432171
Location (hg38): chr6:19534944-19839080
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 794 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT107994; ENST00000432171.2
Alternative gene names: ENSG00000226786.2; RP1-167F1.2; ENSG00000228412.7; RP4-625H18.2; AL022068.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -78.9977 non-coding 
CPAT coding probability 1.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MBOAT1-2:14 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MBOAT1-4:2
4.0 lnc-MBOAT1-4:2
4.1 lnc-MBOAT1-2:14
5.0 lnc-MBOAT1-2:14
5.1 lnc-C6orf62-95:7
5.2 lnc-MBOAT1-2:14