Transcript: lnc-MBOAT1-2:23

Basic information

LNCipedia transcript ID: lnc-MBOAT1-2:23 
LNCipedia gene ID: lnc-MBOAT1-2
Location (hg38): chr6:19729134-19733427
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1669 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00012104; NONHSAT108003
Alternative gene names: XLOC_005633; linc-DEK-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -82.8932 non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MBOAT1-2:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MBOAT1-3:7
3.1 lnc-MBOAT1-3:7
4.0 lnc-MBOAT1-3:7
4.1 lnc-MBOAT1-2:23
5.0 lnc-MBOAT1-2:23
5.1 lnc-C6orf62-95:25
5.2 lnc-MBOAT1-2:23