Transcript: lnc-MBOAT1-5:1

Basic information

LNCipedia transcript ID: lnc-MBOAT1-5:1 
LNCipedia gene ID: lnc-MBOAT1-5
Ensembl Gene ID: ENSG00000233848
Ensembl Transcript ID: ENST00000421167
Location (hg38): chr6:20756103-20800694
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 614 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000421167.1; RP3-348I23.2-001; OTTHUMT00000039985.1; NONHSAT108031
Alternative gene names: ENSG00000233848.1; RP3-348I23.2; OTTHUMG00000014339.1; AL513188.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -85.945 non-coding 
CPAT coding probability 0.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MBOAT1-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MBOAT1-5:1
4.0 lnc-MBOAT1-5:1
4.1 lnc-MBOAT1-5:1
5.0 lnc-MBOAT1-5:1
5.1 lnc-C6orf62-84:1
5.2 lnc-MBOAT1-5:1