Transcript: lnc-MBOAT2-11:1

Basic information

LNCipedia transcript ID: lnc-MBOAT2-11:1 
LNCipedia gene ID: lnc-MBOAT2-11
Location (hg38): chr2:8721134-8722686
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1553 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016
Alternative transcript names: ENST00000569008.1; RP11-434B12.1-001; OTTHUMT00000430894.1
Alternative gene names: ENSG00000260837.1; RP11-434B12.1; OTTHUMG00000175715.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -135.8223 non-coding 
CPAT coding probability 4.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MBOAT2-11:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIDINS220-1:1
4.0 lnc-KIDINS220-1:1
4.1 lnc-KIDINS220-1:1
5.0 lnc-KIDINS220-1:1
5.1 lnc-RAD51AP2-132:1
5.2 lnc-MBOAT2-11:1