Transcript: lnc-MBOAT2-1:1

Basic information

LNCipedia transcript ID: lnc-MBOAT2-1:1 
LNCipedia gene ID: lnc-MBOAT2-1
Location (hg38): chr2:9106543-9110322
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 889 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00004136; NONHSAT069030
Alternative gene names: XLOC_001979; linc-MBOAT2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -129.6725 non-coding 
CPAT coding probability 36.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MBOAT2-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MBOAT2-1:1
3.1 lnc-MBOAT2-1:1
4.0 lnc-MBOAT2-1:1
4.1 lnc-MBOAT2-1:1
5.0 lnc-MBOAT2-1:1
5.1 lnc-RAD51AP2-121:1
5.2 lnc-MBOAT2-1:1