Transcript: lnc-MC4R-5:1

Basic information

LNCipedia transcript ID: lnc-MC4R-5:1 
LNCipedia gene ID: lnc-MC4R-5
Ensembl Gene ID: ENSG00000267098
Ensembl Transcript ID: ENST00000591869
Location (hg38): chr18:60630167-60902726
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 558 bp
Exons: 8
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT059592; ENST00000591869.1
Alternative gene names: ENSG00000267098.1; RP11-325K19.1; AC113137.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -18.1001 non-coding 
CPAT coding probability 1.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MC4R-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MC4R-5:1
4.0 lnc-MC4R-5:1
4.1 lnc-MC4R-5:1
5.0 lnc-MC4R-5:1
5.1 lnc-MBD2-59:1
5.2 lnc-MC4R-5:1