Transcript: lnc-MCHR1-6:1

Basic information

LNCipedia transcript ID: lnc-MCHR1-6:1 
LNCipedia gene ID: lnc-MCHR1-6
Location (hg38): chr22:40637012-40638552
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1541 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000057773.1|FTMT28800001304.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -65.8153 non-coding 
CPAT coding probability 1.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MCHR1-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MCHR1-6:1
5.0 lnc-MCHR1-6:1
5.1 lnc-XPNPEP3-6:1
5.2 lnc-MCHR1-6:1