Transcript: lnc-MCL1-7:1

Basic information

LNCipedia transcript ID: lnc-MCL1-7:1 
LNCipedia gene ID: lnc-MCL1-7
Location (hg38): chr1:150548564-150558473
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1297 bp
Exons: 7
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000442435.1; RP11-54A4.2-001; OTTHUMT00000084398.1; NONHSAT006307
Alternative gene names: ENSG00000237781.1; RP11-54A4.2; OTTHUMG00000034864.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -53.0285 non-coding 
CPAT coding probability 29.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MCL1-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf138-1:1
4.0 lnc-C1orf138-1:1
4.1 lnc-C1orf138-1:1
5.0 lnc-C1orf138-1:1
5.1 lnc-MCL1-3:1
5.2 lnc-MCL1-7:1