Transcript: lnc-MCL1-7:4

Basic information

LNCipedia transcript ID: lnc-MCL1-7:4 
LNCipedia gene ID: lnc-MCL1-7
Ensembl Gene ID: ENSG00000237781
Ensembl Transcript ID: ENST00000442435
Location (hg38): chr1:150548562-150557724
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 665 bp
Exons: 6
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000442435.3
Alternative gene names: ENSG00000237781.3; RP11-54A4.2; AL356356.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -80.4142 non-coding 
CPAT coding probability 8.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MCL1-7:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C1orf138-1:4
4.1 lnc-C1orf138-1:4
5.0 lnc-C1orf138-1:4
5.1 lnc-MCL1-3:4
5.2 lnc-MCL1-7:4