Transcript: lnc-MCM3-3:6

Basic information

LNCipedia transcript ID: lnc-MCM3-3:6 
LNCipedia gene ID: lnc-MCM3-3
Location (hg38): chr6:52419151-52420145
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 995 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000088545.1|FTMT22200004046.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -108.6504 non-coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MCM3-3:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MCM3-3:6
5.0 lnc-MCM3-3:6
5.1 lnc-GSTA1-6:6
5.2 lnc-MCM3-3:6