Transcript: lnc-MCM4-7:1

Basic information

LNCipedia transcript ID: lnc-MCM4-7:1 
LNCipedia gene ID: lnc-MCM4-7
Ensembl Gene ID: ENSG00000269924
Ensembl Transcript ID: ENST00000602578
Location (hg38): chr8:47527397-47528148
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 752 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT126449; ENST00000602578.1
Alternative gene names: ENSG00000269924.1; RP11-697N18.4; AC024451.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -35.1125 non-coding 
CPAT coding probability 1.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MCM4-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-1134I14.8.1-7:1
4.0 lnc-RP11-1134I14.8.1-7:1
4.1 lnc-RP11-1134I14.8.1-7:1
5.0 lnc-RP11-1134I14.8.1-7:1
5.1 lnc-KCNU1-131:1
5.2 lnc-MCM4-7:1