Transcript: lnc-MDGA1-1:4

Basic information

LNCipedia transcript ID: lnc-MDGA1-1:4 
LNCipedia gene ID: lnc-MDGA1-1
Location (hg38): chr6:37815777-37819348
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 549 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225945.1|ENST00000415890.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -312.8939 non-coding 
CPAT coding probability 7.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MDGA1-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MDGA1-1:4
5.0 lnc-MDGA1-1:4
5.1 lnc-CPNE5-29:3
5.2 lnc-MDGA1-1:4