Transcript: lnc-MDH1-2:1

Basic information

LNCipedia transcript ID: lnc-MDH1-2:1 
LNCipedia gene ID: lnc-MDH1-2
Location (hg38): chr2:63717122-63717899
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 778 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT071071
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -35.8562 non-coding 
CPAT coding probability 34.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MDH1-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MDH1-2:1
4.0 lnc-MDH1-2:1
4.1 lnc-MDH1-2:1
5.0 lnc-MDH1-2:1
5.1 lnc-AFTPH-28:1
5.2 lnc-MDH1-2:1