Transcript: lnc-MED10-22:1

Basic information

LNCipedia transcript ID: lnc-MED10-22:1 
LNCipedia gene ID: lnc-MED10-22
Location (hg38): chr5:5185087-5187584
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1826 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: ucscGeneNc_uc003jdi_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -115.8686 non-coding 
CPAT coding probability 0.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MED10-22:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MED10-22:1
4.0 lnc-MED10-22:1
4.1 lnc-MED10-22:1
5.0 lnc-MED10-22:1
5.1 lnc-IRX2-55:1
5.2 lnc-MED10-22:1