Transcript: lnc-MED13L-12:1

Basic information

LNCipedia transcript ID: lnc-MED13L-12:1 
LNCipedia gene ID: lnc-MED13L-12
Ensembl Gene ID: ENSG00000276308
Ensembl Transcript ID: ENST00000617627
Location (hg38): chr12:115318657-115320405
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1749 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000617627.1
Alternative gene names: ENSG00000276308.1; RP11-116D17.4; AC078880.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.3033 non-coding 
CPAT coding probability 5.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MED13L-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TBX3-7:1
4.1 lnc-TBX3-7:1
5.0 lnc-TBX3-7:1
5.1 lnc-MED13L-11:1
5.2 lnc-MED13L-12:1