Transcript: lnc-MED15-1:11

Basic information

LNCipedia transcript ID: lnc-MED15-1:11 
LNCipedia gene ID: lnc-MED15-1
Location (hg38): chr22:20497284-20499351
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 519 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029765; NONHSAT083553
Alternative gene names: XLOC_014159; linc-MED15


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.2419 non-coding 
CPAT coding probability 1.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MED15-1:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF74-1:9
3.1 lnc-ZNF74-1:9
4.0 lnc-MED15-1:11
4.1 lnc-MED15-1:11
5.0 lnc-MED15-1:11
5.1 lnc-SERPIND1-5:10
5.2 lnc-MED15-1:11