Transcript: lnc-MED30-3:2

Basic information

LNCipedia transcript ID: lnc-MED30-3:2 
LNCipedia gene ID: lnc-MED30-3
Location (hg38): chr8:118111989-118113608
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1620 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000100452.1|FTMT23200006464.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -256.0543 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MED30-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AC023590.1.1-3:2
5.0 lnc-AC023590.1.1-3:2
5.1 lnc-COLEC10-3:3
5.2 lnc-MED30-3:2