Transcript: lnc-MEF2A-6:2

Basic information

LNCipedia transcript ID: lnc-MEF2A-6:2 
LNCipedia gene ID: lnc-MEF2A-6
Location (hg38): chr15:99822283-99839206
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 324 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023549; NONHSAT051073
Alternative gene names: XLOC_011383; linc-ASB7-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -152.4415 non-coding 
CPAT coding probability 0.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MEF2A-6:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MEF2A-1:1
3.1 lnc-MEF2A-1:1
4.0 lnc-CTD-2054N24.2.1-6:7
4.1 lnc-CTD-2054N24.2.1-6:7
5.0 lnc-CTD-2054N24.2.1-6:7
5.1 lnc-ARRDC4-49:1
5.2 lnc-MEF2A-6:2