Transcript: lnc-MEIS1-2:1

Basic information

LNCipedia transcript ID: lnc-MEIS1-2:1 
LNCipedia gene ID: lnc-MEIS1-2
Location (hg38): chr2:66327349-66328841
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 774 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000437790; ENST00000437790.1; AC092669.2-001; OTTHUMT00000328009.1
Alternative gene names: ENSG00000241254; AC092669.2; ENSG00000241254.1; OTTHUMG00000152808.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -120.1653 non-coding 
CPAT coding probability 3.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MEIS1-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MEIS1-2:2
3.1 lnc-MEIS1-2:1
4.0 lnc-MEIS1-2:1
4.1 lnc-MEIS1-2:1
5.0 lnc-MEIS1-2:1
5.1 lnc-AFTPH-48:2
5.2 lnc-MEIS1-2:1