Transcript: lnc-MEIS2-2:1

Basic information

LNCipedia transcript ID: lnc-MEIS2-2:1 
LNCipedia gene ID: lnc-MEIS2-2
Location (hg38): chr15:36798597-36818506
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1984 bp
Exons: 4
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000430593
Alternative gene names: ENSG00000223518; AC019016.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -95.6571 non-coding 
CPAT coding probability 5.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MEIS2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MEIS2-2:1
3.1 lnc-MEIS2-2:1
4.0 lnc-MEIS2-2:1
4.1 lnc-MEIS2-2:1
5.0 lnc-MEIS2-2:1
5.1 lnc-NANOGP8-15:2
5.2 lnc-MEIS2-2:1