Transcript: lnc-MESD-2:3

Basic information

LNCipedia transcript ID: lnc-MESD-2:3 
LNCipedia gene ID: lnc-MESD-2
Ensembl Gene ID: ENSG00000277782
Ensembl Transcript ID: ENST00000620635
Location (hg38): chr15:80999593-80999981
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 389 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000620635.1
Alternative gene names: ENSG00000277782.1; RP11-775C24.5; AC068870.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -254.8494 non-coding 
CPAT coding probability 9.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MESD-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-MESDC2-2:3
4.1 lnc-MESDC2-2:3
5.0 lnc-MESDC2-2:3
5.1 lnc-FSD2-26:3
5.2 lnc-MESD-2:3