Transcript: lnc-MEST-7:5

Basic information

LNCipedia transcript ID: lnc-MEST-7:5 
LNCipedia gene ID: lnc-MEST-7
Ensembl Gene ID: ENSG00000271522
Ensembl Transcript ID: ENST00000604514
Location (hg38): chr7:130790208-130791724
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1517 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT123359; ENST00000604514.1
Alternative gene names: ENSG00000271522.1; RP11-36B6.1; AC016831.6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.9572 non-coding 
CPAT coding probability 2.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MEST-7:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MKLN1-7:1
4.0 lnc-MKLN1-7:1
4.1 lnc-MKLN1-7:1
5.0 lnc-MKLN1-7:1
5.1 lnc-CPA1-7:1
5.2 lnc-MEST-7:5