Transcript: lnc-METTL23-16:2

Basic information

LNCipedia transcript ID: lnc-METTL23-16:2 
LNCipedia gene ID: lnc-METTL23-16
Ensembl Gene ID: ENSG00000261335
Ensembl Transcript ID: ENST00000565271
Location (hg38): chr17:76671942-76673658
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1717 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000565271.1; RP11-318A15.2-001; OTTHUMT00000431490.1; NONHSAT056067
Alternative gene names: ENSG00000261335.1; RP11-318A15.2; OTTHUMG00000176088.1; AC005837.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -49.5499 non-coding 
CPAT coding probability 24.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-METTL23-16:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-METTL23-2:1
4.0 lnc-METTL23-2:1
4.1 lnc-METTL23-2:1
5.0 lnc-METTL23-2:1
5.1 lnc-ZACN-16:2
5.2 lnc-METTL23-16:2