Transcript: lnc-METTL26-1:5

Basic information

LNCipedia transcript ID: lnc-METTL26-1:5 
LNCipedia gene ID: lnc-METTL26-1
Ensembl Gene ID: ENSG00000228201
Ensembl Transcript ID: ENST00000455294
Location (hg38): chr16:648473-649200
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 389 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000455294.1; AL022341.3-001; OTTHUMT00000109344.1
Alternative gene names: ENSG00000228201.1; AL022341.3; OTTHUMG00000048041.1; AL022341.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -180.358 non-coding 
CPAT coding probability 8.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-METTL26-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C16orf13-1:1
4.0 lnc-C16orf13-1:1
4.1 lnc-C16orf13-1:1
5.0 lnc-C16orf13-1:1
5.1 lnc-PKMYT1-127:5
5.2 lnc-METTL26-1:5