Transcript: lnc-METTL5-4:160

Basic information

LNCipedia transcript ID: lnc-METTL5-4:160 
LNCipedia gene ID: lnc-METTL5-4
Location (hg38): chr2:170341086-170343511
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 397 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000413923.1; AC068280.1-001; OTTHUMT00000333427.1
Alternative gene names: ENSG00000244445.1; AC068280.1; OTTHUMG00000154004.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -156.3616 non-coding 
CPAT coding probability 2.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-METTL5-4:160 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC007405.2.1-4:4
4.0 lnc-AC007405.2.1-4:4
4.1 lnc-AC007405.2.1-4:4
5.0 lnc-AC007405.2.1-4:4
5.1 lnc-METTL5-4:78
5.2 lnc-METTL5-4:160