Transcript: lnc-METTL5-4:97

Basic information

LNCipedia transcript ID: lnc-METTL5-4:97 
LNCipedia gene ID: lnc-METTL5-4
Ensembl Gene ID: ENSG00000231898
Ensembl Transcript ID: ENST00000457834
Location (hg38): chr2:170344835-170351071
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 683 bp
Exons: 4
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000457834.2; ENST00000457834.6
Alternative gene names: ENSG00000231898.4; AC012594.1; ENSG00000231898.8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -335.8186 non-coding 
CPAT coding probability 0.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-METTL5-4:97 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC007405.2.1-4:14
4.0 lnc-AC007405.2.1-4:14
4.1 lnc-AC007405.2.1-4:14
5.0 lnc-AC007405.2.1-4:14
5.1 lnc-METTL5-4:15
5.2 lnc-METTL5-4:97