Transcript: lnc-MEX3B-2:2

Basic information

LNCipedia transcript ID: lnc-MEX3B-2:2 
LNCipedia gene ID: lnc-MEX3B-2
Location (hg38): chr15:81859766-81967101
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 869 bp
Exons: 7
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00023758; NONHSAT047755
Alternative gene names: XLOC_011550; linc-TMC3-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -99.6131 non-coding 
CPAT coding probability 9.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MEX3B-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MEX3B-2:1
3.1 lnc-MEX3B-2:2
4.0 lnc-MEX3B-2:2
4.1 lnc-MEX3B-2:2
5.0 lnc-MEX3B-2:2
5.1 lnc-FSD2-18:2
5.2 lnc-MEX3B-2:2