Transcript: lnc-MEX3D-3:2

Basic information

LNCipedia transcript ID: lnc-MEX3D-3:2 
LNCipedia gene ID: lnc-MEX3D-3
Location (hg38): chr19:1549466-1549637
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 225 bp
Exons: 2
Sources: Hangauer et al., 2013
Alternative transcript names: FPKM1_group_14309_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 21.5599 non-coding 
CPAT coding probability 6.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MEX3D-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MEX3D-3:2
4.0 lnc-MEX3D-3:2
4.1 lnc-MEX3D-3:2
5.0 lnc-MEX3D-3:2
5.1 lnc-ZNF77-86:2
5.2 lnc-MEX3D-3:2