Transcript: lnc-MFSD14B-6:1

Basic information

LNCipedia transcript ID: lnc-MFSD14B-6:1 
LNCipedia gene ID: lnc-MFSD14B-6
Ensembl Gene ID: ENSG00000236095
Ensembl Transcript ID: ENST00000416455
Location (hg38): chr9:94900429-94904754
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 779 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000416455.1; RP11-49O14.2-001; OTTHUMT00000053193.1; NONHSAT133336
Alternative gene names: ENSG00000236095.1; RP11-49O14.2; OTTHUMG00000020273.1; AL807757.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -251.538 non-coding 
CPAT coding probability 1.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MFSD14B-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HIATL1-6:1
4.0 lnc-HIATL1-6:1
4.1 lnc-HIATL1-6:1
5.0 lnc-HIATL1-6:1
5.1 lnc-FAM120A-52:1
5.2 lnc-MFSD14B-6:1