Transcript: lnc-MGAT1-3:6

Basic information

LNCipedia transcript ID: lnc-MGAT1-3:6 
LNCipedia gene ID: lnc-MGAT1-3
Location (hg38): chr5:180808838-180810505
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 313 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT105813
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -204.1832 non-coding 
CPAT coding probability 4.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MGAT1-3:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZFP62-3:6
4.0 lnc-MGAT1-3:6
4.1 lnc-MGAT1-3:6
5.0 lnc-MGAT1-3:6
5.1 lnc-OR2Y1-4:6
5.2 lnc-MGAT1-3:6