Transcript: lnc-MGAT5B-3:1

Basic information

LNCipedia transcript ID: lnc-MGAT5B-3:1 
LNCipedia gene ID: lnc-MGAT5B-3
Location (hg38): chr17:77101442-77102574
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1133 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT056120; FPKM1_group_13377_transcript_3
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -24.7546 non-coding 
CPAT coding probability 0.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MGAT5B-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MGAT5B-3:1
4.0 lnc-MGAT5B-3:1
4.1 lnc-MGAT5B-3:1
5.0 lnc-MGAT5B-3:1
5.1 lnc-ZACN-25:1
5.2 lnc-MGAT5B-3:1