Transcript: lnc-MGME1-5:1

Basic information

LNCipedia transcript ID: lnc-MGME1-5:1 
LNCipedia gene ID: lnc-MGME1-5
Location (hg38): chr20:17911161-17912490
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1330 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000052772.1|ENCT00000259752.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -11.1842 non-coding 
CPAT coding probability 11.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MGME1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-C20orf72-5:1
5.0 lnc-C20orf72-5:1
5.1 lnc-CFAP61-32:1
5.2 lnc-MGME1-5:1