Transcript: lnc-MGST1-3:1

Basic information

LNCipedia transcript ID: lnc-MGST1-3:1 
LNCipedia gene ID: lnc-MGST1-3
Location (hg38): chr12:16786762-16787841
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 256 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000539266; ENST00000539266.1; RP11-239A17.1-001; OTTHUMT00000401402.1
Alternative gene names: ENSG00000255740; RP11-239A17.1; ENSG00000255740.1; OTTHUMG00000168857.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MGST1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MGST1-3:1
3.1 lnc-MGST1-3:1
4.0 lnc-MGST1-3:1
4.1 lnc-MGST1-3:1
5.0 lnc-MGST1-3:1
5.1 lnc-BCL2L14-79:1
5.2 lnc-MGST1-3:1