Transcript: lnc-MGST1-3:2

Basic information

LNCipedia transcript ID: lnc-MGST1-3:2 
LNCipedia gene ID: lnc-MGST1-3
Location (hg38): chr12:16786762-16787845
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 260 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015
Alternative transcript names: NONHSAT027164; ENST00000539266.2
Alternative gene names: ENSG00000255740.2; RP11-239A17.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MGST1-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MGST1-3:2
4.0 lnc-MGST1-3:2
4.1 lnc-MGST1-3:2
5.0 lnc-MGST1-3:2
5.1 lnc-BCL2L14-79:2
5.2 lnc-MGST1-3:2