Transcript: lnc-MGST2-3:1

Basic information

LNCipedia transcript ID: lnc-MGST2-3:1 
LNCipedia gene ID: lnc-MGST2-3
Location (hg38): chr4:139763056-139775574
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 7085 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000070342.1|ENCT00000324435.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -33.1456 non-coding 
CPAT coding probability 2.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MGST2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MGST2-3:1
5.0 lnc-MGST2-3:1
5.1 lnc-NAA15-10:1
5.2 lnc-MGST2-3:1