Transcript: lnc-MICAL2-1:5

Basic information

LNCipedia transcript ID: lnc-MICAL2-1:5 
LNCipedia gene ID: lnc-MICAL2-1
Location (hg38): chr11:12086871-12089106
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2236 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000255400.1|FTMT24400000607.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -110.9581 non-coding 
CPAT coding probability 1.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MICAL2-1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MICAL2-1:5
5.0 lnc-MICAL2-1:5
5.1 lnc-AMPD3-23:3
5.2 lnc-MICAL2-1:5