Transcript: lnc-MICAL3-7:1

Basic information

LNCipedia transcript ID: lnc-MICAL3-7:1 
LNCipedia gene ID: lnc-MICAL3-7
Location (hg38): chr22:18139740-18140052
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 313 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT083261; FPKM1_group_20276_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.9971 non-coding 
CPAT coding probability 2.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MICAL3-7:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-XXbac-B461K10.4.1-7:1
4.0 lnc-MICAL3-7:1
4.1 lnc-MICAL3-7:1
5.0 lnc-MICAL3-7:1
5.1 lnc-RTN4R-48:1
5.2 lnc-MICAL3-7:1