Transcript: lnc-MID1-1:21

Basic information

LNCipedia transcript ID: lnc-MID1-1:21 
LNCipedia gene ID: lnc-MID1-1
Location (hg38): chrX:10848643-11056012
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 239 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017290; NONHSAT136249
Alternative gene names: XLOC_008111; linc-MID1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -55.7362 non-coding 
CPAT coding probability 0.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MID1-1:21 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ARHGAP6-1:5
3.1 lnc-ARHGAP6-1:5
4.0 lnc-ARHGAP6-1:5
4.1 lnc-ARHGAP6-1:5
5.0 lnc-ARHGAP6-1:5
5.1 lnc-PCSK1N-219:20
5.2 lnc-MID1-1:21