Transcript: lnc-MIXL1-5:4

Basic information

LNCipedia transcript ID: lnc-MIXL1-5:4 
LNCipedia gene ID: lnc-MIXL1-5
Location (hg38): chr1:226186841-226190032
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3192 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000037612.1|ENCT00000018295.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
LSYNTASNK 100% antisense-2
Lee translation initiation sites non-coding 
PhyloCSF score -22.7763 non-coding 
CPAT coding probability 0.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MIXL1-5:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MIXL1-5:4
5.0 lnc-MIXL1-5:4
5.1 lnc-ZNF678-51:3
5.2 lnc-MIXL1-5:4