Transcript: lnc-MKL1-1:1

Basic information

LNCipedia transcript ID: lnc-MKL1-1:1 
LNCipedia gene ID: lnc-MKL1-1
Ensembl Gene ID: ENSG00000229999
Ensembl Transcript ID: ENST00000414261
Location (hg38): chr22:40372664-40388290
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 432 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000414261.1; RP5-1042K10.10-001; OTTHUMT00000321518.1; NONHSAT086847
Alternative gene names: ENSG00000229999.1; RP5-1042K10.10; OTTHUMG00000151143.1; ENSG00000229999.2; ENSG00000229999.6; AL022238.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -135.4656 non-coding 
CPAT coding probability 2.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MKL1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MKL1-1:1
4.0 lnc-MKL1-1:1
4.1 lnc-MKL1-1:1
5.0 lnc-MKL1-1:1
5.1 lnc-DNAJB7-10:1
5.2 lnc-MKL1-1:1