Transcript: lnc-MMADHC-2:4

Basic information

LNCipedia transcript ID: lnc-MMADHC-2:4 
LNCipedia gene ID: lnc-MMADHC-2
Location (hg38): chr2:148877875-148885587
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2045 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT074889; ENST00000446781.2
Alternative gene names: ENSG00000231079.3; AC105402.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -160.4187 non-coding 
CPAT coding probability 3.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MMADHC-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MMADHC-2:4
4.0 lnc-MMADHC-2:4
4.1 lnc-MMADHC-2:4
5.0 lnc-MMADHC-2:4
5.1 lnc-MMADHC-2:4
5.2 lnc-MMADHC-2:4