Transcript: lnc-MMP21-2:5

Basic information

LNCipedia transcript ID: lnc-MMP21-2:5 
LNCipedia gene ID: lnc-MMP21-2
Location (hg38): chr10:125788577-125795227
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 777 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT016915
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 926.67 coding 
CPAT coding probability 32.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MMP21-2:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UROS-2:5
4.0 lnc-UROS-2:5
4.1 lnc-UROS-2:5
5.0 lnc-UROS-2:5
5.1 lnc-ADAM12-2:5
5.2 lnc-MMP21-2:5