Transcript: lnc-MMP23B-1:4

Basic information

LNCipedia transcript ID: lnc-MMP23B-1:4 
LNCipedia gene ID: lnc-MMP23B-1
Location (hg38): chr1:1735817-1737251
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 497 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT000361
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 93.7409 coding 
CPAT coding probability 5.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MMP23B-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MMP23B-1:4
4.0 lnc-MMP23B-1:4
4.1 lnc-MMP23B-1:4
5.0 lnc-MMP23B-1:4
5.1 lnc-VAMP3-86:4
5.2 lnc-MMP23B-1:4