Transcript: lnc-MMRN1-12:16

Basic information

LNCipedia transcript ID: lnc-MMRN1-12:16 
LNCipedia gene ID: lnc-MMRN1-12
Ensembl Gene ID: ENSG00000251095
Ensembl Transcript ID: ENST00000512077
Location (hg38): chr4:89587866-89660355
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 457 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000512077.1; RP11-115D19.1-002; OTTHUMT00000364077.1; NONHSAT097399; ENST00000512077.5
Alternative gene names: ENSG00000251095.1; RP11-115D19.1; OTTHUMG00000161187.1; ENSG00000251095.2; ENSG00000251095.6; AC097478.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -74.2957 non-coding 
CPAT coding probability 0.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MMRN1-12:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MMRN1-2:3
4.0 lnc-MMRN1-2:3
4.1 lnc-MMRN1-2:3
5.0 lnc-MMRN1-2:3
5.1 lnc-CCSER1-13:16
5.2 lnc-MMRN1-12:16