Transcript: lnc-MMRN1-12:19

Basic information

LNCipedia transcript ID: lnc-MMRN1-12:19 
LNCipedia gene ID: lnc-MMRN1-12
Ensembl Gene ID: ENSG00000251095
Ensembl Transcript ID: ENST00000507916
Location (hg38): chr4:89627784-89720172
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 602 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT097401; ENST00000507916.2; ENST00000507916.6
Alternative gene names: ENSG00000251095.2; RP11-115D19.1; ENSG00000251095.6; AC097478.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -99.6672 non-coding 
CPAT coding probability 2.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MMRN1-12:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TIGD2-1:6
4.0 lnc-MMRN1-2:12
4.1 lnc-MMRN1-2:12
5.0 lnc-MMRN1-2:12
5.1 lnc-CCSER1-13:19
5.2 lnc-MMRN1-12:19