Transcript: lnc-MMRN1-12:7

Basic information

LNCipedia transcript ID: lnc-MMRN1-12:7 
LNCipedia gene ID: lnc-MMRN1-12
Location (hg38): chr4:89490947-89491750
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 578 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008164; NONHSAT097389
Alternative gene names: XLOC_003608; linc-MMRN1-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 26.1625 non-coding 
CPAT coding probability 3.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MMRN1-12:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TIGD2-1:1
3.1 lnc-TIGD2-1:1
4.0 lnc-MMRN1-2:8
4.1 lnc-MMRN1-2:8
5.0 lnc-MMRN1-2:8
5.1 lnc-CCSER1-13:7
5.2 lnc-MMRN1-12:7