Transcript: lnc-MMRN1-2:33

Basic information

LNCipedia transcript ID: lnc-MMRN1-2:33 
LNCipedia gene ID: lnc-MMRN1-2
Ensembl Gene ID: ENSG00000277695
Ensembl Transcript ID: ENST00000615968
Location (hg38): chr4:89747802-89755853
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 522 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000615968.1
Alternative gene names: ENSG00000277695.1; RP11-115D19.4; AC097478.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -8.6108 non-coding 
CPAT coding probability 2.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MMRN1-2:33 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-MMRN1-9:1
4.1 lnc-MMRN1-2:33
5.0 lnc-MMRN1-2:33
5.1 lnc-CCSER1-10:33
5.2 lnc-MMRN1-2:33